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MDACC Sequencing and ncRNA Program

Overview of Services

The Sequencing and ncRNA Program (ncRNA core), led by Chang-Gong Liu, Ph.D., is a shared resource established in 2009 to support ncRNA cancer research efforts at MD Anderson Cancer Center and Institutions under the UT system. The core has been well equipped with updated, emerging and cutting-edge technologies and platforms, such as next generation sequencing and microarray, to explore genetic changes of both RNA and DNA levels. The NGS services provided in this core are whole genome resequencing, targeted genome (exome, CHIPseq, amplicons) sequencing, whole transcriptome RNA sequencing, targeted RNA sequencing and small RNA sequencing by using highly accurate NGS sequencers of Illumina NextSeq series, Ion Torrent PGM and Ion Proton. The microarray-based services also are provided for RNA expression profiling and DNA genotyping. In addition, the core has recently acquired HTG Edge system to work directly on the most difficult samples of FFPE, plasma/serum and PAXgene for miRNome and targeted RNA sequencing.

Leadership

 

Director
Chang-gong Liu, Ph.D.
Professor, Department of Experimental Therapeutics
Phone: 713-792-2287 (office)
Lab: 713-745-8182
E-mail: cgliu@mdanderson.org

 

Director of Operations
Xiuping Liu, M.D.

Associate Professor, Department of Experimental Therapeutics
Phone: 713-792-2292 (office)
Lab: 713-745-8182
E-mail: xliu3@mdanderson.org

 

Research Investigator
Ping Xiong
Department of Experimental Therapeutics
Phone: 713-745-8182
E-mail: pxiong@mdanderson.org

 

Sr. Research Assistant
Lei Kang
Department of Experimental Therapeutics
Phone: 713-745-8182
E-mail: LKang@mdanderson.org

 

Getting Started

Interested in working with the Sequencing and ncRNA Program?

 

Current iLab users login by clicking the green "Login" button in the top right corner .

New users must first register HERE or by hitting the blue "Sign-Up" button in the top right corner.

Location and hours of operation

Hours Location

Monday-Friday, 8 AM - 5 PM          

4SCR3.2080, South Campus Research Building 4 

Links and Resources

  1. http://www.mdanderson.org/ncrnaprogram/

Contacts

Name Role Phone Email Location
Chang-gong Liu, Ph.D.
Director
 
713-792-2287
 
cgliu@mdanderson.org
 
4SCR3.1037
 
Xiuping Liu, M.D.
Operations Director
 
713-792-2292
 
xliu3@mdanderson.org
 
4SCR3.1017
 

Service list


Search available services: View: by category alphabetically
10X Genomics (2)
5500XL SOLiD™Sequencing***, 99,99% Accuracy (7)
Affymetrix GeneChip - Chip Only (7)
Affymetrix GeneChip - Sample Processing (3)
Bioanalyzer and Nanodrop (7)
Expression Analysis (2)
HTG Edge Array/EdgeSeq (4)
Illumina Next Seq 500 Sequencing (16)
Ion Torrent PGM and Ion Proton Sequencing (9)
PacBio (1)
Real-Time qRT-PCR (1)
miRNA Xpression Profiling (2)


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