The Biospecimen Extraction Resource (BER) provides a centralized laboratory for standardized, high-quality DNA, RNA and protein extraction from blood, tissues, saliva, cells, or other patient-derived biospecimens. Additional services include DNA and RNA quality check, Picogreen DNA quantitation and whole blood processing for plasma. Our facility is utilized by both lab-based investigators who want fast turn-around time for standardized and high-quality extractions or whole blood processing and non-lab-based investigators (majority are clinicians) who are in great need of the service of sample processing. High quality of DNA/RNA products is the foundation of successful cancer research such as analysis of genetic alterations, gene expression profiling and next generation sequencing. We work very closely with the Sequencing and Microarray Facility (SMF) and the DNA/RNA samples extracted from us can be submitted directly from our core to SMF across the hallway.
Director
Office: Dan L. Duncan Building (CPB4.3616)
Phone: 713-792-8016
E-mail: jiangu@mdanderson.org
Haidee Chancoco
Research Laboratory Manager
Phone: 713-834-6173
E-mail: hchancoc@mdanderson.org
Hours:
By appointment
Location:
The facility is located on the 15th floor of the Mitchell Basic Sciences Research Building, S15.8218.
Name | Role | Phone | Location | |
---|---|---|---|---|
Jian Gu, Ph.D. |
Director
|
713-792-8016
|
jiangu@mdanderson.org
|
|
Haidee D. Chancoco |
Research Laboratory Manager
|
713-834-6173
|
hchancoc@mdanderson.org
|
S15.8218
|
Service list |
► Extraction (11) | |||
Name | Description | Price | |
---|---|---|---|
Circulating Nucleic Acid Extraction from plasma | Inquire | ||
DNA extraction (1ml - 2ml From Blood) | Inquire | ||
DNase Digestion of RNA before RNA Cleanup | Inquire | ||
Paxgene or Tempus Blood RNA extraction |
External out of network
$50.00
each
|
||
Simultaneous RNA/DNA extraction from tissue and FFPE |
Internal
$75.00
each
|
||
DNA extraction (from frozen tissue/cells) |
DNA from frozen tissue/cells |
Inquire | |
DNA extraction (from FFPE tissues) |
DNA from FFPE tissues (max 3 slides/sample) |
Inquire | |
additional FFPE unstained slides if more than 3) |
Per Slide # of extra FFPE slides for DNA/RNA extraction |
Inquire | |
DNA extraction (From Saliva) |
DNA extraction from saliva |
Inquire | |
RNA extraction |
RNA extraction |
Inquire | |
Protein extraction |
Protein extraction from fresh frozen tissue |
Inquire | |
► Quality control and quantification (3) | |||
Name | Description | Price | |
Electrophoresis using the Tape Station 4200 for RNA or DNA |
Per Sample |
Inquire | |
Qubit concentration readings |
Per Sample |
Inquire | |
RNA clean - up |
Internal
$10.00
each
|